clstutils-package |
Sequence based classification and selection of reference sequences. |
classifyPlacements |
Taxonomic classification by phylogenetic placement. |
clstutils |
Sequence based classification and selection of reference sequences. |
findOutliers |
Identify outlier objects given a square distance matrix. |
maxDists |
Select a maximally diverse set of items given a distance matrix. |
prettyTree |
Draw an annotated phylogenetic tree. |
refpkgContents |
Read the contents of a collection of reference sequences ("refpkg"). |
seqdat |
Annotation for the Enterococcus sequence data set. |
seqs |
Enterococcus sequence data set. |
taxonomyFromRefpkg |
Extract taxonomic information from a refpkg. |
treeDists |
Provide objects for determining distances among nodes of a reference tree. |