Tools for Manipulating the FOBI Ontology


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Documentation for package ‘fobitools’ version 1.12.0

Help Pages

annotate_foods Text Mining Pipeline to Annotate Free Nutritional Text with FOBI
fobi FOBI Table File - Jul 23, 2021
fobi_graph Generate FOBI Graphs
fobi_terms FOBI's 'ontology_index' object - Jul 23, 2021
foods FOBI Foods Table File - Feb 02, 2021
idmap FOBI Identifier Map File - Jul 18, 2021
id_convert Convert Metabolite Identifiers
msea Performs a preranked metabolite set enrichment analysis (MSEA)
ora Classical Over Representation Analysis with FOBI
parse_fobi Parse FOBI in a Readable Tabular Format